G/frame: Oligonucleotide Statistics in Human Genomic Coding/Non-Coding Sequences

Non-coding, Oligo size: 6nt

Information: 11.59 bit

Most frequent oligos:

TTTTTT 17.0 0.0328

AAAAAA 12.6 0.0256

ATTTTT 6.1 0.014

Rare oligos:

TACGCG 0.0217 9.3e-05

TCGACG 0.0206 8.8e-05

Coding, oligo size: 6nt

Information: 11.40 bit

Most frequent oligos:

GAGGAG 11.9 0.0244

CTGCTG 9.9 0.0211

...

AAAAAA 2.5 0.00666

CCCCCC 1.3 0.00379

GGGGGG 0.6 0.00187

TTTTTT 0.9 0.00271

Rare oligos:

TCGCGT 0.0517 0.000205

TCGCGA 0.0413 0.000167

Oligo size: 7nt

AAAAAAA 2.6 0.002

CCCCCCC 0.745 0.000656

GGGGGGG 0.366 0.000345

TTTTTTT 0.497 0.000455

-pi log pi

Frequency ratio = n pi

Vorherige Folie

Nächste Folie

Zurück zur ersten Folie

Graphik-Version anzeigen